IGV

The IGV tool is a genomic data visualization tool that supports the interactive display of multiple sequencing data.

IGV tool entry

After entering the personal project, click on the interaction analysis module and select the IGV tool to use.

Click Run. It will load for a while when used for the first time, display the provided demo sample data, and provide four buttons: Genome, Track, Help and Save.

• Genome: Selection of genome files (only two versions of humanGRCH38 and GRCH37 are provided by default). You can also build your own ref for use.

• Track: Loading of analysis data of personal mutation sites (currently only vcf.gz and its index file vcf.tbi are supported)

• Help: Official manual and operation instructions of the software

• Save: Save the picture of the variant site to data management

Tips

Special attention is required: The current tool only supports visual viewing of vcf.gz and its index file vcf.tbi, and does not currently support other data formats. In addition to entering from the interactive analysis entrance, you can also click on the vcf.gz data from the data management to enter the visualization interface. For detailed operation guidance, please refer to the official instructions of the Help module.